BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003G12LP1|AL425186
(645 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1508 1259 0.0
>3x_Contig1508
Length = 7899
Score = 1259 bits (634), Expect = 0.0
Identities = 643/646 (99%), Gaps = 1/646 (0%)
Strand = Plus / Minus
Query: 1 atcagtaagacgtgaattggagacagaattcaaagtaagaattcatgttccaaacaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3675 atcagtaagacgtgaattggagacagaattcaaagtaagaattcatgttccaaacaagaa 3616
Query: 61 cagctcagatgaaaaggtcactgtttctggttctcctgctaatattgaatcttgcaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3615 cagctcagatgaaaaggtcactgtttctggttctcctgctaatattgaatcttgcaagaa 3556
Query: 121 gaaaatcgaaaaagaaatcatcagggatagtttcgacttggaaattgctgtccctgccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3555 gaaaatcgaaaaagaaatcatcagggatagtttcgacttggaaattgctgtccctgccaa 3496
Query: 181 ataccattcatacgtttctaactctggtttgattttccaaacgttaagaaacgaattttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3495 ataccattcatacgtttctaactctggtttgattttccaaacgttaagaaacgaattttc 3436
Query: 241 tattgatgtttctcatggtaacttgactagaaccgcacaaagtttatctcgtgcgaacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3435 tattgatgtttctcatggtaacttgactagaaccgcacaaagtttatctcgtgcgaacta 3376
Query: 301 caaggttcctgaaaatgtcgctggtggtgaaaatgaaagctccaacgtcctcattcaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3375 caaggttcctgaaaatgtcgctggtggtgaaaatgaaagctccaacgtcctcattcaatc 3316
Query: 361 tgtcacagaaactgaagctaaggttgacacaatcccatggagattaacatactcaccaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3315 tgtcacagaaactgaagctaaggttgacacaatcccatggagattaacatactcaccaat 3256
Query: 421 tgacttgagtgatgttttaggtgaagactataagaaagatgaagaaagcaaagatcaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3255 tgacttgagtgatgttttaggtgaagactataagaaagatgaagaaagcaaagatcaagt 3196
Query: 481 cttagaaaaagcgtccaaattgatagaagacagaatcgccgaggctaaacttkttaacac 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 3195 cttagaaaaagcgtccaaattgatagaagacagaatcgccgaggctaaacttgttaacac 3136
Query: 541 cgaa-gtttcgtttggtccaaggatgcaaagaagtttaactctattgttggaccaaacgg 599
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3135 cgaaggtttcgtttggtccaaggatgcaaagaagtttaactctattgttggaccaaacgg 3076
Query: 600 tagaaatatcagagaaatcagaaatgccactaaaactkttatccat 645
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3075 tagaaatatcagagaaatcagaaatgccactaaaactgttatccat 3030
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5741
Number of Sequences: 1807
Number of extensions: 5741
Number of successful extensions: 126
Number of sequences better than 1.0e-20: 1
length of query: 645
length of database: 10,358,551
effective HSP length: 16
effective length of query: 629
effective length of database: 10,329,639
effective search space: 6497342931
effective search space used: 6497342931
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)